chr11:117855727:C>T Detail (hg19)

Information

Genome

Assembly Position
hg19 chr11:117,855,727-117,855,727
hg38 chr11:117,985,012-117,985,012 View the variant detail on this assembly version.

HGVS

[No Data.]
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

JP HGVD:[No Data.]
ToMMo:0.098
NCBN:[No Data.]
NCBN(Hondo):[No Data.]
NCBN(Ryukyu):[No Data.]
East asia ExAC:[No Data.]

Prediction

ClinVar

Clinical Significance
Review star [No Data.]
Show details
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.002 Ischemic stroke To investigate whether IL10, IL10RA, and IL10RB polymorphisms are associated wit... BeFree 23096091 Detail
0.002 Ischemic Cerebrovascular Accident To investigate whether IL10, IL10RA, and IL10RB polymorphisms are associated wit... BeFree 23096091 Detail
Annotation

Annotations

DescrptionSourceLinks
To investigate whether IL10, IL10RA, and IL10RB polymorphisms are associated with the risk of ischem... DisGeNET Detail
To investigate whether IL10, IL10RA, and IL10RB polymorphisms are associated with the risk of ischem... DisGeNET Detail
Gene
-
dbSNP
rs4252243 dbSNP
Genome
hg19
Position
chr11:117,855,727-117,855,727
Variant Type
snv
Reference Allele
C
Alternative Allele
T
ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
PASS
Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
rs4252243
Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
0.098
Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
1643
Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
16758
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